Single Cell RNA Sequencing
Single-cell RNA sequencing (scRNA-seq) takes transcriptomics analysis a step further, providing unprecedented insights into the individual cellular heterogeneity within a population of seemingly identical cells in complex biological systems. This modern transcriptomics technology builds upon the foundations of bulk RNA-seq by incorporating microfluidics or other single-cell isolation techniques to keep track of RNA from individual cells. Generally speaking, scRNA-seq captures the mRNA from individual cells, converts it into complementary DNA (cDNA), and constructs barcoded libraries for high-throughput sequencing. By examining gene expression at the cellular level, scRNA-seq enables the identification of rare cell types, elucidates cellular states, enhances the understanding of disease progression and mechanisms, and identifies developmental trajectories, among others.
Importantly, scRNA-seq has become a powerful tool for immune profiling at the single-cell level, allowing detailed characterization of immune cell populations, activation states, and functional diversity, as well as the analysis of immune receptor repertoires and cell–cell interactions. These capabilities significantly enhance the understanding of immune responses in health and disease, including cancer, infection, autoimmunity, and inflammatory disorders.
Empower your single cell omics research with Novogene’s end-to-end workflow powered by 10X Genomics’ GEM-X technology.
Technology
Sequencing Platforms
-
ILLUMINA
NovaSeq X Plus
System specifications:Up to 16 Tb of output (or up to 52 billion single reads) per dual 25B flow cell run. Run time of nearly 48 h. Q30 ≥85% (PE150)

-
ILLUMINA
NovaSeq 6000
System specifications:80Gb - 6Tb output range, 1.6 - 40 B paired end reads per run, and PE150, PE250, PE50, etc.

-
PACBIO
PacBio Revio System
System specifications:N50>15kb, 90% of bases ≥Q30, 90Gb HiFi yield / SMRT Cell, 360Gb HiFi yield / run, 24-hour run times etc.

-
PacBio
PacBio Sequel II/IIe System
System specifications:N50>15kb, read lengths up to 25kb (CCS), >99.999% (QV50) consensus accuracy, coverage across high-GC/repeat regions. HiFi reads for PacBio Sequel IIe only.

-
Nanopore
Nanopore PromethION
System specifications:Ultra-long reads up to 2Mb, high yields for large genomes, REAL real-time and accessible for flexible budgets.

